JOINT IBMATH AND QGM WORKSHOP

Title: Geometry and topology of macromolecule folding

http://qgm.au.dk/events/show/artikel/qgm-workshop/

CENTRE for QUANTUM GEOMETRY of MODULI SPACES
DEPARTMENT of MATHEMATICS, AARHUS UNIVERSITY, DENMARK

Date: 4-6 December 2013
Time: 09:30 - 22:00

PROGRAM

Wednesday 4 Dec
Location: Aud. D3 (1531-119)

10:00 - 11:00 Common breakfast in QGM Lounge
11:15 - 12:15 Siego Ihara (Tokyo), iBMath Project: An integrative approach of biology and mathematics for dynamical transcription processes
12:15 - 14:00 Lunch
14:00 - 15:00 Jørgen Ellegaard Andersen (Aarhus), Quantum Field Theory and folding of Marcomolecules
15:00 - 15:30 Coffee break
15:30 - 16:30 Yoichi Nakata (Tokyo), On simplified path-preference cellular-automaton model
16:30 - 17:00 Coffee break
17:00 - 18:00 Massimo Andreatta (Hong Kong), Inferring residue-residue contacts from coevolution in multiple sequence alignments
18:30 - Social networking dinner in “Staff lounge”

Thursday 5 Dec
Location: Aud. G1

10:00 - 11:00 Common breakfast in QGM Lounge
11:15 - 12:15 Ebbe Sloth Andersen (Aarhus), Analysis of protein structure and dynamics using SO(3) plots of H-bonded peptide planes
12:15 - 14:00 Lunch
14:00 - 15:00 Santiago Laplagne (Hong Kong), Similarity kernels on the space of proteins and applications
15:00 - 15:30 Coffee break
15:30 - 16:30 Cody Geary (Aarhus), Co-transcriptional folding of artificial RNA molecules
16:30 - 17:00 Coffee break
NOTE: Go to Koll. G4
17:00 - 18:00 Keisuke Matsuya (Tokyo), Spatial pattern of discrete and ultradiscrete Gray-Scott model

Friday 6 Dec
Location: Aud. G1

09:30 - 10:00 Common breakfast in QGM Lounge
10:00 - 11:00 Hiroki Kodama (Tokyo), Minimal $C^1$-diffeomorphisms of the circle which admit measurable fundamental domains
11:00 - 11:30 Coffee break
11:30 - 12:30 Masataka Kanki (Tokyo), Discrete integrable equations over finite fields
12:30 - 14:00 Lunch
14:00 - 15:00 Inasa Nakamura (Tokyo), On surface links whose link groups are abelian
15:00 - 15:30 Coffee break
15:30 - 16:30 Yuanyuan Bao (Tokyo), Extending Kauffman's definition of Alexander polynomial to bipartite spatial graphs
17:00 Christmas Party (dinner and drinks in “MatLab”)

Organisers

Sigeo Ihara, iBMath, The University of Tokyo
Jørgen Ellegaard Andersen, QGM, Aarhus University